hilbert.cnb.csic.es

Biocomputing Unit

Developping new algorithms and software to extract the maximum biological knowledge in 3D-EM and X-ray microscopy. Started in 1989 and headed by Dr. Jose Maria Carazo, the Biocomputing Unit (BCU) of the National Center for Biotechnology. Instruct Image Processing Center (I2PC). Works in the area of Three-dimensional electron and X-ray microscopy. We develop the well known XMIPP. Structural Biology by 3D-EM Microscopy and Soft X-rays Cellular Tomography. Information Integration in Structural Biology.

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Biocomputing Unit | hilbert.cnb.csic.es Reviews

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Developping new algorithms and software to extract the maximum biological knowledge in 3D-EM and X-ray microscopy. Started in 1989 and headed by Dr. Jose Maria Carazo, the Biocomputing Unit (BCU) of the National Center for Biotechnology. Instruct Image Processing Center (I2PC). Works in the area of Three-dimensional electron and X-ray microscopy. We develop the well known XMIPP. Structural Biology by 3D-EM Microscopy and Soft X-rays Cellular Tomography. Information Integration in Structural Biology.

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Biocomputing Unit | hilbert.cnb.csic.es Reviews

https://hilbert.cnb.csic.es

Developping new algorithms and software to extract the maximum biological knowledge in 3D-EM and X-ray microscopy. Started in 1989 and headed by Dr. Jose Maria Carazo, the Biocomputing Unit (BCU) of the National Center for Biotechnology. Instruct Image Processing Center (I2PC). Works in the area of Three-dimensional electron and X-ray microscopy. We develop the well known XMIPP. Structural Biology by 3D-EM Microscopy and Soft X-rays Cellular Tomography. Information Integration in Structural Biology.

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hilbert.cnb.csic.es

1

Software – Biocomputing Unit

http://hilbert.cnb.csic.es/software

XMIPP: A suite of image processing programs for single-particle 3D Electron Microscopy & more. Scipion: An image processing framework for 3D Electron Microscopy. Dimero: Data Integration for Molecular Reconstruction. 3DEM Benchmark: Automatic and standardized benchmarking of image processing applications. Electron Microscopy Exchange: Standardize information exchange in single-particle between different 3D-EM software packages. 3DEM Methods: An extensive repository of 3D Electron Microscopy methods.

2

Publications – Biocomputing Unit

http://hilbert.cnb.csic.es/publications

Scipion: A software framework toward integration, reproducibility and validation in 3D electron microscopy. De la Rosa-Trevín JM, Quintana A, Del Cano L, Zaldívar A, Foche I, Gutiérrez J, Gómez-Blanco J, Burguet-Castell J, Cuenca-Alba J, Abrishami V, Vargas J, Otón J, Sharov G, Vilas JL, Navas J, Conesa P, Kazemi M, Marabini R, Sorzano CO, Carazo JM. Journal of Structural Biology. 195(1):93-9. Local analysis of strains and rotations for macromolecular electron microscopy maps. Tabas-Madrid D, Segura J, S...

3

The Biocomputing Cluster – Biocomputing Unit

http://hilbert.cnb.csic.es/staff

X63;arazo@cnb.csic.es. Blanca@cnb.csic.es. Jcuenca@cnb.csic.es. Biocomputing Unit at Centro Nacional de Biotecnología. Vabrishami@cnb.csic.es. Jbusselez@cnb.csic.es. X6c;delcano@cnb.csic.es. X70;conesa@cnb.csic.es. Jose Miguel de la Rosa. Jmdelarosa@cnb.csic.es. X6a;gomez@cnb.csic.es. 109;kazemi@cnb.csic.es. Mmmtnez@cnb.csic.es. Rmelero@cnb.csic.es. X6a;navas@cnb.csic.es. X6a;oton@cnb.csic.es. Rsanchez@cnb.csic.es. Carlos Oscar Sánchez Sorzano. Polytechnic School at Universidad Autónoma de Madrid.

4

Directions – Biocomputing Unit

http://hilbert.cnb.csic.es/directions

You can find us at the National Center for Biotechnology. In the campus of the Universidad Autónoma de Madrid. You can reach the university campus by train, bus or car:. Station (lines C1, C7 and C10 of “Cercanías”. The suburban train service). It is a 10 minute train ride from Chamartín station, and a 20 minute ride from Atocha station. Typical train frequency is 10 minutes. Following the “Colmenar Viejo” direction, exit “Universidad Autónoma”. National Center for Biotechnology. 34) 91 585 4922.

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Developping new algorithms and software to extract the maximum biological knowledge in 3D-EM and X-ray microscopy. Started in 1989 and headed by Dr. Jose Maria Carazo, the Biocomputing Unit (BCU) of the National Center for Biotechnology. Instruct Image Processing Center (I2PC). Works in the area of Three-dimensional electron and X-ray microscopy. We develop the well known XMIPP. Structural Biology by 3D-EM Microscopy and Soft X-rays Cellular Tomography. Information Integration in Structural Biology.

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