gmt.genome.wustl.edu

Genome Modeling Tools - Main

July 20, 2015. Support for TIGRA-SV has migrated to Ken Chen’s laboratory at MD Anderson Cancer Center. Please visit http:/ bioinformatics.mdanderson.org/main/TIGRA for the latest versions and support information. Full source history is still maintained in the github repository. You can download this release on Github. SomaticSniper v1.0.5.0. July 16, 2015. Field to bases called in the tumor and normal genotypes (see #5. With this release,. Is similarly more stringent and no longer reports ambiguous bases.

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Genome Modeling Tools - Main | gmt.genome.wustl.edu Reviews

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July 20, 2015. Support for TIGRA-SV has migrated to Ken Chen’s laboratory at MD Anderson Cancer Center. Please visit http:/ bioinformatics.mdanderson.org/main/TIGRA for the latest versions and support information. Full source history is still maintained in the github repository. You can download this release on Github. SomaticSniper v1.0.5.0. July 16, 2015. Field to bases called in the tumor and normal genotypes (see #5. With this release,. Is similarly more stringent and no longer reports ambiguous bases.

<META> KEYWORDS

1 genome modeling tools

2 tigra sv support migrated

3 major changes

4 bcount

5 minor changes

6 cmake install prefix

7 numerous documentation updates

8 tumor

9 normal

10 introducing dgidb

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Genome Modeling Tools - Main | gmt.genome.wustl.edu Reviews

https://gmt.genome.wustl.edu

July 20, 2015. Support for TIGRA-SV has migrated to Ken Chen’s laboratory at MD Anderson Cancer Center. Please visit http:/ bioinformatics.mdanderson.org/main/TIGRA for the latest versions and support information. Full source history is still maintained in the github repository. You can download this release on Github. SomaticSniper v1.0.5.0. July 16, 2015. Field to bases called in the tumor and normal genotypes (see #5. With this release,. Is similarly more stringent and no longer reports ambiguous bases.

INTERNAL PAGES

gmt.genome.wustl.edu

1

Genome Modeling Tools - TIGRA-SV Support Migrated

http://gmt.genome.wustl.edu/2015/07/20/tigra-sv_migrated_released.html

July 20, 2015. Support for TIGRA-SV has migrated to Ken Chen’s laboratory at MD Anderson Cancer Center. Please visit http:/ bioinformatics.mdanderson.org/main/TIGRA for the latest versions and support information. Full source history is still maintained in the github repository. You can download this release on Github. Genome Modeling Tools is produced by The Genome Institute at Washington University School of Medicine.

2

Genome Modeling Tools - SomaticSniper v1.0.0

http://gmt.genome.wustl.edu/2012/05/08/somatic-sniper_v1.0.0.2_released.html

SomaticSniper v1.0.0. May 08, 2012. You can download this release on Github. Genome Modeling Tools is produced by The Genome Institute at Washington University School of Medicine.

3

Genome Modeling Tools - MendelScan v1.2.0

http://gmt.genome.wustl.edu/2014/03/05/mendelscan_v1.2.0_released.html

MendelScan v1.2.0. March 05, 2014. We fixed a bug related to segmentation scoring, added broader VEP output format compatibility, and enabled preliminary recessive scoring functionality for the score subcommand. You can download this release on Github. Genome Modeling Tools is produced by The Genome Institute at Washington University School of Medicine.

4

Genome Modeling Tools - Introducing DGIdb

http://gmt.genome.wustl.edu/2013/10/16/introducing-dgidb.html

October 16, 2013. Genome Modeling Tools is produced by The Genome Institute at Washington University School of Medicine.

5

Genome Modeling Tools - SomaticSniper v1.0.5.0

http://gmt.genome.wustl.edu/2015/07/16/somatic-sniper_v1.0.5.0_released.html

SomaticSniper v1.0.5.0. July 16, 2015. This release alters how counts and average base qualities are reported in the VCF. Previous versions double counted ambiguous bases and improperly restricted the. Field to bases called in the tumor and normal genotypes (see #5. With this release,. Is now more stringent, only counting a read as a reference base if it matches that base exactly. Is similarly more stringent and no longer reports ambiguous bases. Is now respected if specified during compilation.

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Genome Modeling Tools - Main

July 20, 2015. Support for TIGRA-SV has migrated to Ken Chen’s laboratory at MD Anderson Cancer Center. Please visit http:/ bioinformatics.mdanderson.org/main/TIGRA for the latest versions and support information. Full source history is still maintained in the github repository. You can download this release on Github. SomaticSniper v1.0.5.0. July 16, 2015. Field to bases called in the tumor and normal genotypes (see #5. With this release,. Is similarly more stringent and no longer reports ambiguous bases.

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