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Genomics and Bioinformatics @ Davidson College

Server at Davidson College. You have discovered the web server for the Genome Consortium for Active Teaching ( G. At Davidson College. This provides students and faculty unparalleled capacity and access. Generation I of the server was launched August 7, 2003 and Generation II was launched January 1, 2010. Soon, there will be a lot more on these pages. Public domain and open source software for microarray data analysis. Divide and BLAST for discovering evolutionary origins of protein domains. Dr Laurie J&...

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Genomics and Bioinformatics @ Davidson College | gcat.davidson.edu Reviews

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Server at Davidson College. You have discovered the web server for the Genome Consortium for Active Teaching ( G. At Davidson College. This provides students and faculty unparalleled capacity and access. Generation I of the server was launched August 7, 2003 and Generation II was launched January 1, 2010. Soon, there will be a lot more on these pages. Public domain and open source software for microarray data analysis. Divide and BLAST for discovering evolutionary origins of protein domains. Dr Laurie J&...

<META> KEYWORDS

1 genomics tools

2 magic tool

3 hemoglobin mutagenesis

4 microarray clustering tool

5 kyte doolittle hydropathy plots

6 derisi lab

7 word

8 or excel

9 synthetic biology tools

10 alog

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genomics tools,magic tool,hemoglobin mutagenesis,microarray clustering tool,kyte doolittle hydropathy plots,derisi lab,word,or excel,synthetic biology tools,alog,the oligator,ggajet,the wiseroptimizer,the loligator,the success o rater,pcr primer design

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Genomics and Bioinformatics @ Davidson College | gcat.davidson.edu Reviews

https://gcat.davidson.edu

Server at Davidson College. You have discovered the web server for the Genome Consortium for Active Teaching ( G. At Davidson College. This provides students and faculty unparalleled capacity and access. Generation I of the server was launched August 7, 2003 and Generation II was launched January 1, 2010. Soon, there will be a lot more on these pages. Public domain and open source software for microarray data analysis. Divide and BLAST for discovering evolutionary origins of protein domains. Dr Laurie J&...

INTERNAL PAGES

gcat.davidson.edu

1

Golden Gate Assembly Primer Designer

http://gcat.davidson.edu/SynBio13/primer

Server at Davidson College. Prime Time Primer Designer. A Golden Gate Assembly Tool. Please enter the plasmid sequence (plain text):. Please enter the sequence you wish to insert:. Starting location of cut:. Ending location of cut:. Choose two sticky ends (one letter and one number):. Genome Consortium for Active Teaching ( G. Top of page ▲. RNAstructure: software for RNA secondary structure prediction and analysis.". JS Reuter and D.H. Mathews. And Dr. A. Malcolm Campbell. Is licensed under a Creative C...

2

GGAJET

http://gcat.davidson.edu/SynBio13/GGAJET

Server at Davidson College. Golden Gate Assembly Junction Evaluative Tool. Plasmid/Gene Sequences (FASTA format only):. Currently limited to BsaI. Melting temperature (°C):. Junction length (base pairs):. Number of desired junctions:. Currently limited to 4 junctions. PCR annealing temperature (°C):. Note: only insert A, T, C, or G. All other characters are not accepted and will be erased. Email me results (when GGAJET finishes). Genome Consortium for Active Teaching ( G. Top of page ▲. Add one junction ...

3

The Oligator

http://gcat.davidson.edu/igem10/index.html

Server at Davidson College. A program designed to choose oligos for DNA sequences of most lengths. If the Oligator does not produce a satisfactory set of Oligos, or if you want to specify particular oligos, consider using the Do-It-Yourself Oligator. Note: This site is optimized for Safari and Firefox. Chrome and IE are NOT supported. Note: U's will automatically be converted to T's. Enter DNA sequence between 15 and 20,000 base pairs (5' to 3'). Enter a tag for sequence (optional):. ORF begins at base.

4

Hemoglobin Mutagenesis Page

http://gcat.davidson.edu/bioinformatics/hemomut.html

This web page is part of the course materials for an undergraduate biology course at Davidson College. The Hemoglobin Mutagenesis Page. Do Not Print This Page - It requires your interaction online! This page is designed to help you see what happens when a gene contains a single incorrect nucleotide. The example established here is for sickle cell and uses the beta subunit of human hemoglobin. You may want to find other genes and try them at another time. Directions to see what happens in sickle cell:.

5

The Success-O-Rater

http://gcat.davidson.edu/SynBio12/successorater.html

Server at Davidson College. A program designed to determine the number of trials needed to find a successful sample. Based on the single sample success rate, this program will return a table with the number of trials (or samples) needed to find at least one successful sample at the corresponding probabilitiy (.50, .75, .90, .95, .99). Below, enter the single sample success rate and, if desired, a specific probability of success. Estimated success rate :. Custom probability of success (optional):.

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Genomics and Bioinformatics @ Davidson College

Server at Davidson College. You have discovered the web server for the Genome Consortium for Active Teaching ( G. At Davidson College. This provides students and faculty unparalleled capacity and access. Generation I of the server was launched August 7, 2003 and Generation II was launched January 1, 2010. Soon, there will be a lot more on these pages. Public domain and open source software for microarray data analysis. Divide and BLAST for discovering evolutionary origins of protein domains. Dr Laurie J&...

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