modencode.sciencemag.org
modENCODE | Worm as a model organism
http://modencode.sciencemag.org/worm/introduction
As a Model Organism An Introduction. In this section, you will:. Find out about what makes the worm. Like the fruit fly, a successful model organism - and about some of the worm's unique and unusual advantages for many studies. Drill down into three. That look at the worm as a model in studies of aging and programmed cell death, and at how RNA interference is used to churn out new and useful mutant copies for the lab. Take a number of. Consider and answer a series of. Some of the most plentiful. As a mod...
devoworm.weebly.com
Software and Data
http://devoworm.weebly.com/software-and-data.html
DevoWorm Code Repository Github repo. Reproductive Capacity, Developmental Plasticity, and Evolution in. B Alicea). Archived at Figshare, doi:10.1101 /m9.figshare.045609. Referenced in: Alicea, B. Genotype-specific developmental plasticity shapes the timing and robustness of reproductive capacity in. BioRxiv, doi:10.1101/045609). Experimental Evolution Datasets (. Wildtype and mutant genotypes). BioRxiv, doi:10.1101/042143). Division Event (temporal) data. Original source: Sulston, J.E., Schieren...Mdash...
lanctotlab.org
Lanctot Lab - Links
http://www.lanctotlab.org/en/liens_EN.html
WDDD - Worm Dev Dyn Database. EPIC - Expression patterns. Biology of the nucleus. Labs (far from exhaustive list). Int Mouse Strain Resources. Euro Cond Mouse Mutagenesis. Eurexpress (Embryo, in situs). NIH Knockout Mouse Project. Int Gene Trap Consortium. Mutant Mouse Resource NIH. Bioinformatics tools and databases. Genome, protein and plasmid databases. DB of Biological databases. InterPro - Protein Domains. Jaspar (TF Binding sites). KEGG-Kyoto Encyc Genes Genomes. PDB - Protein DataBank. Institute o...
cytoshow.org
CytoSHOW: Wild type N2 (Bristol) slice4D DIC movie with sample CytoSHOW annotations
http://www.cytoshow.org/2011/03/wild-type-n2-bristol-slice4d-dic-movie.html
View, analyze and annotate mutidimensional cellular anatomy and development. Wild type N2 (Bristol) slice4D DIC movie with sample CytoSHOW annotations. NOTE: YouTube "thumbnails" are just an appetizer. Each genotype has 4D movies that can be viewed interactively at full resolution. Experience the full Slice4D movie in. A 4D movie recorded by Kevin OConnell. Time steps were taken at two different rates:. Every 15 seconds early,. Every 60 seconds late. March 25, 2011 at 10:58 AM. March 31, 2011 at 8:52 AM.
cytoshow.org
CytoSHOW: lev-8::gfp transcriptional fusion [Expr7308]
http://www.cytoshow.org/2009/11/acr-13gfp-transcriptional-fusion.html
View, analyze and annotate mutidimensional cellular anatomy and development. Lev-8: gfp transcriptional fusion [Expr7308]. Lev-8/acr-13 wormbase gene report. NOTE: YouTube "thumbnails" are just an appetizer. Each genotype has several 4D movies that can be viewed interactively at full resolution. Acr-13%gfp 0ac slc.mov. Acr-13%gfp 1ac slc.mov. Acr-13%gfp 0ac pryx.mov. Acr-13%gfp 1ac pryx.mov. Movies made with hanging-embryo mounts (random DV/RL orientation for each embryo). Reporter on integrated transgene.
cytoshow.org
CytoSHOW: Troubleshoot
http://www.cytoshow.org/p/troubleshoot.html
View, analyze and annotate mutidimensional cellular anatomy and development. Troubleshooting CytoSHOW on your system? You may need this one-time installation:. Must be installed and updated(! On your computer. Click this Java. Link to test whether your installation is up-to-date. If you are on a Mac, you must be running OS 10.5 or later for your Java to be up-to-date. Subscribe to: Posts (Atom). On using this site, data, or software. Click here to Run CytoSHOW! Some sample scenes in CytoSHOW:. SPIM high-...
cytoshow.org
CytoSHOW: Viewing Multiple Dimensions
http://www.cytoshow.org/p/view.html
View, analyze and annotate mutidimensional cellular anatomy and development. CytoSHOW is a viewing/analysis program that allows you to watch, adjust contrast/color, synchronize, overlay, measure, annotate (etc.) movies from the CytoSHOW collection, without. For very large movie files to download. You can choose multiple movies to watch in synchrony. You can capture clips of complex multi-movie comparisons for publication or to hardcopy your viewing experience. Subscribe to: Posts (Atom). 4D DIC with cell...
cytoshow.org
CytoSHOW: cwn-1::yfp transcriptional fusion [Expr7311]
http://www.cytoshow.org/2009/11/cwn-1yfp-transcriptional-fusion.html
View, analyze and annotate mutidimensional cellular anatomy and development. Cwn-1: yfp transcriptional fusion [Expr7311]. Cwn-1 wormbase gene report. NOTE: YouTube "thumbnails" are just an appetizer. Each genotype has several 4D movies that can be viewed interactively at full resolution. Cwn-1%yfp 1ar slc.mov. Cwn-1%yfp 3ar slc.mov. Cwn-1%yfp 1ar pryx.mov. Cwn-1%yfp 3ar pryx.mov. November 30, 2009 at 11:32 PM. Hanging embryo mounts (random orientation for each embryo). 1Jar = lateral view. Histone: GFP ...
cytoshow.org
CytoSHOW: fkh-2::nls-gfp transcriptional fusion [Expr7317]
http://www.cytoshow.org/2009/11/fkh-2gfp-transcriptional-fusion.html
View, analyze and annotate mutidimensional cellular anatomy and development. Fkh-2: nls-gfp transcriptional fusion [Expr7317]. Fkh-2 wormbase gene report. NOTE: YouTube "thumbnails" are just an appetizer. Each genotype has several 4D movies that can be viewed interactively at full resolution. Fkh-2%NLS%gfp 0at slc.mov. Fkh-2%NLS%gfp 1at slc.mov. Fkh-2%NLS%gfp 0at pryx.mov. Fkh-2%NLS%gfp 1at pryx.mov. Movies are made from hanging embryo mounts (random orientation for each embryo). From the EPIC project.
