docs.ties.apiary.io

ties.dbmi.pitt.edu

Loading Your Data | TIES

http://ties.dbmi.pitt.edu/documentation/for-installers/loading-your-data

Managing Case Sets and Orders. Managing Users & Studies. Security & Regulatory Compliance. TIES Cancer Research Network. Request a TIES Node License. The entry point for your own data in the TIES system is the private database. TIES pipelines can then take over and transform the data to its final searchable form. ORG – Only one organization (i.e. only one record) should be present in this table. IDENT PATIENT – Contains the identified/private information for the patient. DOCUMENT TYPE ID – The ID t...

ties.dbmi.pitt.edu

VM Quick Start Guide | TIES

http://ties.dbmi.pitt.edu/documentation/for-installers/vm-installation

Managing Case Sets and Orders. Managing Users & Studies. Security & Regulatory Compliance. TIES Cancer Research Network. Request a TIES Node License. TIES VM Quick Start Guide. Learn how to install and use the TIES VM. If you want to allow others to access TIES, enable networking features of the VM or deploy it in a virtualized IT infrastructure. If you are having trouble getting through the installation, you can get help from the TIES team through two main avenues. Step 2: Download and unzip the VM.

ties.dbmi.pitt.edu

For Institutions | TIES

http://ties.dbmi.pitt.edu/documentation/for-institutions

Managing Case Sets and Orders. Managing Users & Studies. Security & Regulatory Compliance. TIES Cancer Research Network. Request a TIES Node License. Dept of Biomedical Informatics, University of Pittsburgh.

ties.dbmi.pitt.edu

Managing Users & Studies | TIES

http://ties.dbmi.pitt.edu/documentation/user-manual/managing-users-studies

Managing Case Sets and Orders. Managing Users & Studies. Security & Regulatory Compliance. TIES Cancer Research Network. Request a TIES Node License. Managing Users and Studies. Creating new users and studies, adding roles and studies to users, and revoking access. Administrators in TIES manage accounts and can create new users and studies. Upon logging in as an Administrator, the Manage Accounts tab is available. In this tab, you can see users and studies in the system. Add a TIES User. Edit a TIES User.

ties.dbmi.pitt.edu

Configuration and Maintenance | TIES

http://ties.dbmi.pitt.edu/configuration-and-maintenance

Managing Case Sets and Orders. Managing Users & Studies. Security & Regulatory Compliance. TIES Cancer Research Network. Request a TIES Node License. Learn how to configure and maintain a TIES installation. Delimited File Importer Service. This selection lets you configure the public and private database parameters for this server. They are configured on separate tabs. If you have multiple servers, you will need to run the control panel and make changes on each of the servers. Once you have these, you ca...

ties.dbmi.pitt.edu

Documentation | TIES

http://ties.dbmi.pitt.edu/documentation

Managing Case Sets and Orders. Managing Users & Studies. Security & Regulatory Compliance. TIES Cancer Research Network. Request a TIES Node License. Dept of Biomedical Informatics, University of Pittsburgh.

ties.dbmi.pitt.edu

System Overview | TIES

http://ties.dbmi.pitt.edu/documentation/for-institutions/system-overview

Managing Case Sets and Orders. Managing Users & Studies. Security & Regulatory Compliance. TIES Cancer Research Network. Request a TIES Node License. Learn about the TIES system. TIES stands for T. Ystem It provides tools for de-identification and automated coding of free-text structured pathology reports. It also has a client that can be used to search these coded reports. The client also supports Tissue Banking and Honest Broker operations. TIES focuses on two important challenges of bioinformatics:.

ties.dbmi.pitt.edu

Download | TIES

http://ties.dbmi.pitt.edu/download

Managing Case Sets and Orders. Managing Users & Studies. Security & Regulatory Compliance. TIES Cancer Research Network. Request a TIES Node License. Easy installation options customized for casual and enterprise users. The TIES Virtual Machine (VM) is a self-contained TIES installation on a Linux OS. See the VM Quick Start Guide. Designed for casual users. Download VM (4GB .ova). Install an entire node or separate TIES components. Needs a license key. See the Custom Installation Guide.

ties.dbmi.pitt.edu

Help Videos | TIES

http://ties.dbmi.pitt.edu/documentation/user-manual/help-videos

Managing Case Sets and Orders. Managing Users & Studies. Security & Regulatory Compliance. TIES Cancer Research Network. Request a TIES Node License. Learn how to use TIES. Dept of Biomedical Informatics, University of Pittsburgh.

ties.dbmi.pitt.edu

Getting Started | TIES

http://ties.dbmi.pitt.edu/documentation/user-manual/getting-started

Managing Case Sets and Orders. Managing Users & Studies. Security & Regulatory Compliance. TIES Cancer Research Network. Request a TIES Node License. Accessing the client and logging in. The TIES client is installed as a webapp in the Tomcat webserver on the public server. If you want to access the client from the public server machine, then the URL will be:. Step 1: Select the data network. These are typically the following options:. Step 2: Enter username and password. Step 3: Select role and study.