conreal.niob.knaw.nl

CONREAL Server

Or paste your DNA sequences. Here in multiple FASTA. Format (max. 100 kb per sequence). Rat EXAMPLE SEQUENCE AACAAACAACTACTCAATTCACTAATGTGAATGAGAAGTACCAGGTTGGTTAAGGCAGGC AATCGCTTGTCTTCACCTCCACTGGAGGAAAGAGGCCCCTTTATTTGCTTCCTTCCGCTT GCAAGTCCCACACCCAGCCCTCTCACTCCCCAAAGACTCAGCATAGCTACTGAGAGACAG CTGACTTGAGACCGAGCCTGCCCAGAAGCACAACCTTGGGCACATCCTGTAACTCCCCTT CCTGGTGCATCTATATAGAAACAGAATGCGAAGGCTTATCCCTCTTTATCTTCCTTTCAA CTTTACCAAAGAAAGTCATTATnnnnnnnnnnnnnnnnnnnnnTCCCAGTGAGGCTAGTC TGTGCTCTCAATGGGGGTCTCAAAACGAGACCTT...

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CONREAL Server | conreal.niob.knaw.nl Reviews

<META> DESCRIPTION

Or paste your DNA sequences. Here in multiple FASTA. Format (max. 100 kb per sequence). Rat EXAMPLE SEQUENCE AACAAACAACTACTCAATTCACTAATGTGAATGAGAAGTACCAGGTTGGTTAAGGCAGGC AATCGCTTGTCTTCACCTCCACTGGAGGAAAGAGGCCCCTTTATTTGCTTCCTTCCGCTT GCAAGTCCCACACCCAGCCCTCTCACTCCCCAAAGACTCAGCATAGCTACTGAGAGACAG CTGACTTGAGACCGAGCCTGCCCAGAAGCACAACCTTGGGCACATCCTGTAACTCCCCTT CCTGGTGCATCTATATAGAAACAGAATGCGAAGGCTTATCCCTCTTTATCTTCCTTTCAA CTTTACCAAAGAAAGTCATTATnnnnnnnnnnnnnnnnnnnnnTCCCAGTGAGGCTAGTC TGTGCTCTCAATGGGGGTCTCAAAACGAGACCTT...

<META> KEYWORDS

1 submission form

2 disclaimer

3 search parameters

4 threshold for pwms

5 threshold for homology

6 aligner

7 conreal

8 lagan

9 mavid

10 blastz

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submission form,disclaimer,search parameters,threshold for pwms,threshold for homology,aligner,conreal,lagan,mavid,blastz,tfbs dataset,jaspar vertebrates

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CONREAL Server | conreal.niob.knaw.nl Reviews

https://conreal.niob.knaw.nl

Or paste your DNA sequences. Here in multiple FASTA. Format (max. 100 kb per sequence). Rat EXAMPLE SEQUENCE AACAAACAACTACTCAATTCACTAATGTGAATGAGAAGTACCAGGTTGGTTAAGGCAGGC AATCGCTTGTCTTCACCTCCACTGGAGGAAAGAGGCCCCTTTATTTGCTTCCTTCCGCTT GCAAGTCCCACACCCAGCCCTCTCACTCCCCAAAGACTCAGCATAGCTACTGAGAGACAG CTGACTTGAGACCGAGCCTGCCCAGAAGCACAACCTTGGGCACATCCTGTAACTCCCCTT CCTGGTGCATCTATATAGAAACAGAATGCGAAGGCTTATCCCTCTTTATCTTCCTTTCAA CTTTACCAAAGAAAGTCATTATnnnnnnnnnnnnnnnnnnnnnTCCCAGTGAGGCTAGTC TGTGCTCTCAATGGGGGTCTCAAAACGAGACCTT...

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http://www.molbiol-tools.ca/Transcriptional_factors.htm

See also: DNA MOTIFS. Transcription factor binding sites: several sites are available but I have not been particular impressed with the results when analyzing prokaryotic sequences. Institute for Transcriptional Informatics, Pittsburgh, U.S.A.) -. This tool is intended for promoter sequence analysis and works best with sequences of 500 nt. National Institute of Agrobiological Sciences, Japan). Plant cis-acting regulatory DNA elements. PlnTFDB. D Wilson et al. 2010. Nucl. Acids Res. 36:. Allows identifica...

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CONREAL Server

Or paste your DNA sequences. Here in multiple FASTA. Format (max. 100 kb per sequence). Rat EXAMPLE SEQUENCE AACAAACAACTACTCAATTCACTAATGTGAATGAGAAGTACCAGGTTGGTTAAGGCAGGC AATCGCTTGTCTTCACCTCCACTGGAGGAAAGAGGCCCCTTTATTTGCTTCCTTCCGCTT GCAAGTCCCACACCCAGCCCTCTCACTCCCCAAAGACTCAGCATAGCTACTGAGAGACAG CTGACTTGAGACCGAGCCTGCCCAGAAGCACAACCTTGGGCACATCCTGTAACTCCCCTT CCTGGTGCATCTATATAGAAACAGAATGCGAAGGCTTATCCCTCTTTATCTTCCTTTCAA CTTTACCAAAGAAAGTCATTATnnnnnnnnnnnnnnnnnnnnnTCCCAGTGAGGCTAGTC TGTGCTCTCAATGGGGGTCTCAAAACGAGACCTT...

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