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Welcome to Xie Group

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Welcome to Xie Group | bernstein.harvard.edu Reviews
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2 research
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4 collaborators
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6 pubs
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9 news
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Welcome to Xie Group | bernstein.harvard.edu Reviews

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1

Publications

https://bernstein.harvard.edu/pages/Publications_2015.html

Chen, Huiyi; Shiroguchi, Katsuyuki; Ge, Hao; Xie, X. Sunney Genome-wide study of mRNA degradation and transcript elongation in Escherichia coli. DOI:10.15252/msb.20145794 (2015). Ge, Hao; Qian, Hong; and Xie, X. Sunney Stochastic Phenotype Transition of a Single Cell in an Intermediate Region of Gene State Switching. 7), 078101, DOI:10.1103/PhysRevLett.114.078101 (2015). 3): e0120889, DOI:10.1371/journal.pone.0120889 (2015). Xie, X. Sunney Single Molecules Meet Genomics: Pinpointing Precision Medicine.

2

About Professor Xie

https://bernstein.harvard.edu/pages/AboutProfXie.html

Professor Xiaoliang Sunney Xie. Department of Chemistry and Chemical Biology. Cambridge, MA 02138. Http:/ bernstein.harvard.edu. PhD Chemistry, University of California - San Diego with Professor John D. Simon. BS Chemistry, Peking University, Beijing, P. R. China. Mallinckrodt Professor of Chemistry and Chemical Biology, Harvard University, Department of Chemistry and Chemical Biology. Cheung Kong Visiting Professor, Peking University, Biodynamic Optical Imaging Center. Albany Prize in Medicine Recipient.

3

Funding

https://bernstein.harvard.edu/pages/Funding.html

National Institutes of Health. Http:/ www.nih.gov/. NIH Transformative Research Program (TR01). Http:/ nihroadmap.nih.gov/T-R01/. NIH Director's Pioneer Award. Http:/ nihroadmap.nih.gov/pioneer/. Department of Energy, Office of Science. Http:/ www.science.doe.gov. Office of Basic Energy Sciences. Http:/ www.sc.doe.gov/bes/. Office of Biological and Environmental Research. Http:/ www.er.doe.gov/ober/. Http:/ genomicsgtl.energy.gov/.

4

Collaborators

https://bernstein.harvard.edu/pages/Collaborators.html

149; Fan Bai, Yanyi Huang, Xiaodong Su, Yujie Sun, Fuchou Tang, Hao Ge, Yiqin Gao. Biodynamics Optical Imaging Center, Peking University. National Renewable Energy Laboratory. Dan Orringer and Colleagues. Harvard Medical School and Brigham and Women's Hospital. Harvard Medical School and Massachusetts General Hospital.

5

Group Pictures

https://bernstein.harvard.edu/pages/NewLabs.html

Photos courtesy of Rose Lincoln, Hertz, Udo Loster, Leibinger Foundation, and Marcus Halevi.

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Biophotonics Review: January 2011

http://biophotonicsreview.blogspot.com/2011_01_01_archive.html

Sunday, January 16, 2011. Optogenetics: controlling cell function with light. Nature method's method of the year 2010. Has been announced on an emerging method that is called Optogenetics. The combination of genetic and optical methods enabled scientists to explore biological processes with high temporal and cell-specific resolution. Not only neuroscience but also other cell/tissue related fields have now started to utilize optogenetics to open new landscapes for the study of biology. Ahmet F. Coskun.

woodlab.biop.lsa.umich.edu woodlab.biop.lsa.umich.edu

Wood Lab at UM - Kevin Wood

http://woodlab.biop.lsa.umich.edu/index.php/people/current-members/2-people

Friends of the Lab. Kevin Wood, Ph.D. This email address is being protected from spambots. You need JavaScript enabled to view it. Kevin is an Assistant Professor in the Departments of Biophysics and Physics. He did his undergraduate training in Chemical Physics (BS) at Centre College. 2001), received a Masters in Biology (MS) from UCSD. 2003), and then completed a double Ph.D. in theoretical physics and theoretical chemistry under the guidance of Prof. Katja Lindenberg. Check out our latest paper.

biophotonicsreview.blogspot.com biophotonicsreview.blogspot.com

Biophotonics Review: Faster STORM using compressed sensing

http://biophotonicsreview.blogspot.com/2012/06/faster-storm-using-compressed-sensing.html

Sunday, June 3, 2012. Faster STORM using compressed sensing. This work was published in Nature Methods. Http:/ www.nature.com/nmeth/journal/vaop/ncurrent/full/nmeth.1978.html. Ahmet F. Coskun. Subscribe to: Post Comments (Atom). A blog for the updates in biophotonics, imaging, biomedical technologies, physics and engineering. Biophotonics Centers and Resources. NSF Center for Biophotonics. Aydogan Ozcan, UCLA. Eric Potma, UCI. Mehmet F. Yanik, MIT. Stefan W. Hell, MPI. Sunney Xie, Harvard.

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Biophotonics Review: February 2012

http://biophotonicsreview.blogspot.com/2012_02_01_archive.html

Friday, February 10, 2012. In many third world and developing countries, the distance between people in need of health care and the facilities capable of providing it constitutes a major obstacle to improving health. One solution involves creating medical diagnostic applications small enough to fit into objects already in common use, such as cell phones — in effect, bringing the hospital to the patient. Here we list some of the emerging cell-phone based diagnostics technologies:. Ahmet F. Coskun. PNAS 20...

biophotonicsreview.blogspot.com biophotonicsreview.blogspot.com

Biophotonics Review: August 2010

http://biophotonicsreview.blogspot.com/2010_08_01_archive.html

Friday, August 27, 2010. Label-Free Nonlinear Microscopy reveals Zebrafish Cell Cycling. Together with more explorations of intrinsic nonlinear properties of the biological samples, the nonlinear microscopy has become an extensively used tool to demonstrate morphological visualization of biological structures. Click here to read more about this report:. Cell Lineage Reconstruction of Early Zebrafish Embryos Using Label-Free Nonlinear Microscopy. Science 329 (5994), 967. Ahmet F. Coskun. A new type of nan...

biophotonicsreview.blogspot.com biophotonicsreview.blogspot.com

Biophotonics Review: August 2012

http://biophotonicsreview.blogspot.com/2012_08_01_archive.html

Monday, August 13, 2012. Biology Games for Biomedical Research. Games have become important part of the cultures, bringing lots of entertainment and creativity to the societies. Beyond the traditional understanding of games, recently researchers have started to explore new sets of "serious games" that could provide effective means, including public understanding of science, crowd-source based diagnostics, physical therapy and as well as prediction of the protein folding. At Riedel-Kruse Lab, Stanford ].

biophotonicsreview.blogspot.com biophotonicsreview.blogspot.com

Biophotonics Review: June 2010

http://biophotonicsreview.blogspot.com/2010_06_01_archive.html

Monday, June 21, 2010. Imaging through Turbid Media. A major limitation of conventional microscopes is the penetration depth in turbid media (e.g tissue, thick cells). It is known that turbid media scatter the incoming light, resulting in a messy image after the sample. But there is clever way to undo the effect of scattering medium by simply modulating the incoming light using a Spatial Light Modulator(SLM) or an equivalent device to adjust the wavefront. Ahmet F. Coskun. Here are the articles on MLE:.

biophotonicsreview.blogspot.com biophotonicsreview.blogspot.com

Biophotonics Review: Bleaching/blinking assisted localization microscopy

http://biophotonicsreview.blogspot.com/2012/02/bleachingblinking-assisted-localization.html

Friday, February 10, 2012. Bleaching/blinking assisted localization microscopy. PNAS 2011 108 (52) 21081-21086; published ahead of print December 13, 2011, doi:10.1073/pnas.1117430109. Ahmet F. Coskun. July 31, 2012 at 7:59 PM. Great share friend. I have read all your post here and found it interesting to read. In fact i was able to take note all of the valuable information i was gathered. Thanks. Subscribe to: Post Comments (Atom). Biophotonics Centers and Resources. NSF Center for Biophotonics.

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Biophotonics Review: Speckle-free laser imaging using random laser illumination

http://biophotonicsreview.blogspot.com/2012/06/speckle-free-laser-imaging-using-random.html

Sunday, June 3, 2012. Speckle-free laser imaging using random laser illumination. We recently demonstrated that random lasers can be engineered to provide low spatial coherence. Here, we exploit the low spatial coherence of specifically designed random lasers to demonstrate speckle-free full-field imaging in the setting of intense optical scattering. We quantitatively show that images generated with random laser illumination exhibit superior quality than images generated with spatially coherent illum...

biophotonicsreview.blogspot.com biophotonicsreview.blogspot.com

Biophotonics Review: Compressive sensing resources: An emerging method for all

http://biophotonicsreview.blogspot.com/2012/06/compressive-sensing-resources-emerging.html

Sunday, June 3, 2012. Compressive sensing resources: An emerging method for all. As the compressive sensing research community continues to expand rapidly, it behooves us to heed Shannon's advice. Compressive sensing is also referred to in the literature by the terms: compressed sensing, compressive sampling, and sketching/heavy-hitters. The Compressive Sensing Resources:. Rice University Resources: http:/ dsp.rice.edu/cs. Nuit Blanche Blog: http:/ nuit-blanche.blogspot.com/. Led by Richard Baraniuk.

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Welcome to Xie Group

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