berkeleybop.org

Welcome | Berkeley BOP

Skip to main content. Berkeley Bioinformatics Open-source Projects. The BBOP, located at the Lawrence Berkeley National Labs, is a diverse group of scientific researchers and software engineers dedicated to developing tools and applying computational technologies to solve biological problems. Members of the group contribute to a number of projects, including the Gene Ontology, OBO Foundry, the Phenotypic Quality Ontology, modENCODE, and the Generic Model Organism Database Project.

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Welcome | Berkeley BOP | berkeleybop.org Reviews

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Skip to main content. Berkeley Bioinformatics Open-source Projects. The BBOP, located at the Lawrence Berkeley National Labs, is a diverse group of scientific researchers and software engineers dedicated to developing tools and applying computational technologies to solve biological problems. Members of the group contribute to a number of projects, including the Gene Ontology, OBO Foundry, the Phenotypic Quality Ontology, modENCODE, and the Generic Model Organism Database Project.

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Welcome | Berkeley BOP | berkeleybop.org Reviews

https://berkeleybop.org

Skip to main content. Berkeley Bioinformatics Open-source Projects. The BBOP, located at the Lawrence Berkeley National Labs, is a diverse group of scientific researchers and software engineers dedicated to developing tools and applying computational technologies to solve biological problems. Members of the group contribute to a number of projects, including the Gene Ontology, OBO Foundry, the Phenotypic Quality Ontology, modENCODE, and the Generic Model Organism Database Project.

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apollo.berkeleybop.org

Apollo - Apollo

First instantaneous, collaborative genomic annotation editor available on the Web. Apollo is designed to support geographically dispersed researchers, and the work of a distributed community is coordinated through automatic synchronization: all edits in one client are instantly pushed to all other clients, allowing users to see annotation updates from collaborators in real-time during the editing process. There are no installation requirements for Annotators! Download the latest Apollo release. Help page...

tomodachi.berkeleybop.org

AmiGO 2: Welcome

Genes and gene products. Software." GO models (ALPHA). You are using an AmiGO Labs. Prototype. See here. More information on quick search. To explore Gene Ontology data. The Gene Ontology data for annotations, gene products, and terms using a powerful search syntax and filters. Genes and gene products. Software." GO models (ALPHA). Use the drill-down browser. To view the ontology structure with annotation counts. Use GOOSE to query the legacy GO database with SQL. View the most recent statistics.

build.berkeleybop.org

Dashboard [Jenkins]

No builds in the queue. Build stability: All recent builds failed. 3 mo 25 days - #109. 3 days 0 hr - #123. 3 min 24 sec. Build stability: All recent builds failed. 6 mo 22 days - #859. 3 days 23 hr - #909. 2 min 59 sec. Build stability: All recent builds failed. 8 mo 9 days - #189. 1 min 14 sec. Build stability: No recent builds failed. 22 hr - #706. 9 days 22 hr - #698. 4 min 33 sec. Build stability: 1 out of the last 5 builds failed. 1 yr 2 mo - #227. 1 mo 19 days - #228. 1 yr 10 mo - #3. 1 min 3 sec.

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berkeleybop.org

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Team | BBOP @ LBNL

http://www.berkeleybop.org/people

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genomearchitect.github.io

About Us - Apollo

http://genomearchitect.github.io/about

The Apollo project is a collaboration between Suzanna Lewis’s group at Lawrence Berkeley National Laboratory ( BBOP, the Berkeley Bioinformatics Open-source Projects group. In Ian Holmes’ group. At the University of California Berkeley, and Chris Elsik’s group. At the University of Missouri. Members Emeriti: Gregg Helt ( Genomancer Consulting. Ed Lee ( LinkedIn. Colin Diesh ( University of Missouri. Rob Buels ( Foundation Medicine. Justin Reese ( Genformatic. Mitch Skinner ( Pacific Biosciences.

disease-ontology.org

Disease Ontology - Institute for Genome Sciences - About

http://www.disease-ontology.org/about

This browser does not support visualization of term relationships on the Disease Ontology website. Please use Chrome, Safari or Firefox when using the Disease Ontology website to unlock visualization capabaility. Disease Ontology 2015 update: an expanded and updated database of human diseases for linking biomedical knowledge through disease data. Kibbe WA, Arze C, Felix V, Mitraka E, Bolton E, Fu G, Mungall CJ, Binder JX, Malone J, Vasant D, Parkinson H, Schriml LM. Scientific Advisory Board (2009 - 2012).

genomearchitect.org

About Us - Apollo

http://genomearchitect.org/about

The Apollo project is a collaboration between Suzanna Lewis’s group at Lawrence Berkeley National Laboratory ( BBOP, the Berkeley Bioinformatics Open-source Projects group. In Ian Holmes’ group. At the University of California Berkeley, and Chris Elsik’s group. At the University of Missouri. Members Emeriti: Gregg Helt ( Genomancer Consulting. Ed Lee ( LinkedIn. Colin Diesh ( University of Missouri. Rob Buels ( Foundation Medicine. Justin Reese ( Genformatic. Mitch Skinner ( Pacific Biosciences.

gbrowse.org

GBrowse

http://gbrowse.org/wiki

Was introduced to August 2009 GMOD Meeting. We setted a survey. We hope that you could find 5 minutes to fill it. Who is status ( 145. 128 Genome Sequencing Project. 80 GFF files available. 9 Curated by GBrowse.org. Welcome to GBrowse.org. The number of model organisms has grown in concert with the increasing number of genome-sequencing projects. For this, GBrowse.org project. Goal is create the net among official MOD. GBrowse.org is created to facilitate use about GMOD.

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Welcome | Berkeley BOP

Skip to main content. Berkeley Bioinformatics Open-source Projects. The BBOP, located at the Lawrence Berkeley National Labs, is a diverse group of scientific researchers and software engineers dedicated to developing tools and applying computational technologies to solve biological problems. Members of the group contribute to a number of projects, including the Gene Ontology, OBO Foundry, the Phenotypic Quality Ontology, modENCODE, and the Generic Model Organism Database Project.

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